Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 4-thiouridine(8) synthase thii | E0F20_04345 | Not Available | Positive | 891251 - 892699 | 54873.2 |
| hypothetical protein | E0F20_04350 | Not Available | Negative | 892765 - 893847 | 40313.5 |
| protein deglycase yajl | E0F20_04355 | Not Available | Negative | 893880 - 894470 | 20872.3 |
| 2-dehydropantoate 2-reductase | E0F20_04360 | Not Available | Negative | 894433 - 895344 | 33853.6 |
| yajq family cyclic di-gmp-binding protein | E0F20_04365 | Not Available | Positive | 895519 - 896010 | 18369.9 |
| mfs transporter | E0F20_04370 | Not Available | Negative | 896091 - 897455 | 48814.3 |
| type vi secretion system tube protein hcp | E0F20_04375 | Not Available | Positive | 897638 - 898120 | 18139.4 |
| hypothetical protein | E0F20_04380 | Not Available | Positive | 898132 - 898581 | 16895.5 |
| duf1493 family protein | E0F20_04385 | Not Available | Positive | 898581 - 898940 | 14123.2 |
| protoheme ix farnesyltransferase | E0F20_04390 | Not Available | Negative | 899004 - 899894 | 32475.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

