Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp phosphodiesterase | E0F20_04245 | Not Available | Negative | 873528 - 874109 | 23204.5 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | E0F20_04250 | Not Available | Positive | 874200 - 875270 | 39430.1 |
| trna guanosine(34) transglycosylase tgt | E0F20_04255 | Not Available | Positive | 875326 - 876453 | 42540.0 |
| preprotein translocase subunit yajc | E0F20_04260 | Not Available | Positive | 876476 - 876808 | 11845.8 |
| protein translocase subunit secd | E0F20_04265 | Not Available | Positive | 876836 - 878683 | 66577.0 |
| protein translocase subunit secf | E0F20_04270 | Not Available | Positive | 878694 - 879665 | 35299.5 |
| voc family protein | E0F20_04275 | Not Available | Positive | 879835 - 880200 | 12970.5 |
| yafy family transcriptional regulator | E0F20_04280 | Not Available | Positive | 880224 - 880916 | 26561.9 |
| nucleoside-specific channel-forming protein tsx | E0F20_04285 | Not Available | Negative | 880962 - 881825 | 32708.6 |
| duf3251 domain-containing protein | E0F20_04290 | Not Available | Negative | 882124 - 882663 | 19627.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

