Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Fil | EVY18_01980 | Not Available | Negative | 388491 - 388718 | 8486.57 |
| Gp31 | EVY18_01985 | Not Available | Negative | 388726 - 389235 | 18446.2 |
| Regulatory protein | EVY18_01990 | Not Available | Negative | 389266 - 389529 | 9965.29 |
| Ci repressor | EVY18_01995 | Not Available | Positive | 389660 - 390238 | 20928.8 |
| Integrase | EVY18_02000 | Not Available | Positive | 390238 - 391275 | 39747.9 |
| Attr | Not Available | Not Available | Positive | 391347 - 391379 | Not Available |
| Attl | Not Available | Not Available | Positive | 788289 - 788314 | Not Available |
| Putative prophage integrase | EVY18_03855 | Not Available | Positive | 788470 - 789636 | 44859.4 |
| Dna binding protein | EVY18_03860 | Not Available | Negative | 789652 - 791274 | 62779.4 |
| hypothetical protein | EVY18_03865 | Not Available | Positive | 791629 - 791814 | 6863.34 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

