Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | EVY18_03460 | Not Available | Negative | 699021 - 699869 | 32331.3 |
| taurine abc transporter permease tauc | EVY18_03465 | Not Available | Negative | 699866 - 700696 | 29662.6 |
| taurine abc transporter atp-binding subunit | EVY18_03470 | Not Available | Negative | 700693 - 701460 | 28011.1 |
| taurine abc transporter substrate-binding protein | EVY18_03475 | Not Available | Negative | 701475 - 702437 | 34269.8 |
| response regulator transcription factor | EVY18_03480 | Not Available | Positive | 702773 - 703402 | 22847.6 |
| sensor histidine kinase | EVY18_03485 | Not Available | Positive | 703402 - 704943 | 58073.4 |
| mfs transporter | EVY18_03490 | Not Available | Positive | 705029 - 706333 | 47869.4 |
| abc transporter substrate-binding protein | EVY18_03495 | Not Available | Positive | 706330 - 707361 | 37498.6 |
| iron abc transporter permease | EVY18_03500 | Not Available | Positive | 707431 - 709509 | 75876.1 |
| ferric abc transporter atp-binding protein | EVY18_03505 | Not Available | Positive | 709521 - 710567 | 39212.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

