Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl carboxypeptidase ii | EVY18_30210 | Not Available | Negative | 5685673 - 5686161 | 18431.6 |
| single-stranded dna-binding protein | EVY18_30215 | Not Available | Positive | 5686162 - 5686344 | 6143.0 |
| duf905 domain-containing protein | EVY18_30220 | Not Available | Positive | 5686393 - 5686641 | 9520.21 |
| iron abc transporter permease | EVY18_30225 | Not Available | Positive | 5686846 - 5687142 | 10667.1 |
| phospholipase d family protein | EVY18_30240 | Not Available | Negative | 5688098 - 5688668 | 21502.8 |
| mfs transporter | EVY18_30245 | Not Available | Negative | 5688669 - 5688991 | 11797.3 |
| escn/yscn/hrcn family type iii secretion system atpase | EVY18_30250 | Not Available | Positive | 5688992 - 5689381 | 14606.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EVY18_30255 | Not Available | Positive | 5689463 - 5690061 | 22698.4 |
| lytic transglycosylase domain-containing protein | EVY18_30260 | Not Available | Positive | 5690051 - 5690701 | 24551.3 |
| upf0259 family protein | EVY18_30265 | Not Available | Negative | 5690709 - 5691335 | 22314.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

