Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | EVY18_27535 | Not Available | Negative | 5295398 - 5296324 | 35191.1 |
| hypothetical protein | EVY18_27540 | Not Available | Negative | 5296522 - 5296740 | 8283.14 |
| type iii secretion system protein prgj | EVY18_27545 | Not Available | Positive | 5297128 - 5297237 | 3870.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EVY18_27550 | Not Available | Positive | 5297234 - 5297965 | 27062.9 |
| hypothetical protein | EVY18_27555 | Not Available | Positive | 5298025 - 5298561 | 20933.7 |
| type iii secretion protein hrpe | EVY18_27560 | Not Available | Positive | 5298554 - 5299213 | 24776.4 |
| hypothetical protein | EVY18_27565 | Not Available | Negative | 5299289 - 5300080 | 27183.1 |
| pathogenicity island 1 effector protein sipb | EVY18_27570 | Not Available | Negative | 5300106 - 5301884 | 63102.4 |
| cesd/sycd/lcrh family type iii secretion system chaperone | EVY18_27575 | Not Available | Negative | 5301865 - 5302398 | 20725.2 |
| superoxide dismutase | EVY18_27580 | Not Available | Positive | 5302460 - 5302867 | 14950.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

