Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease family protein | EVY18_25395 | Not Available | Negative | 4932454 - 4934214 | 66030.7 |
| macrodomain ter protein matp | EVY18_25400 | Not Available | Positive | 4934400 - 4934852 | 17803.6 |
| dl-methionine transporter permease subunit | EVY18_25410 | Not Available | Positive | 4936175 - 4936344 | 5784.25 |
| metq/nlpa family lipoprotein | EVY18_25415 | Not Available | Positive | 4936389 - 4937204 | 29433.3 |
| rcs stress response system protein rcsf | EVY18_25420 | Not Available | Positive | 4937321 - 4937725 | 14143.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EVY18_25425 | Not Available | Positive | 4937722 - 4938429 | 26633.9 |
| proline--trna ligase | EVY18_25430 | Not Available | Positive | 4938543 - 4940261 | 63641.3 |
| envelope stress response activation lipoprotein nlpe | EVY18_25435 | Not Available | Negative | 4940306 - 4941004 | 25657.6 |
| aminoacyl-trna hydrolase | EVY18_25440 | Not Available | Negative | 4941035 - 4941457 | 15624.9 |
| yaeq family protein | EVY18_25445 | Not Available | Negative | 4941454 - 4941999 | 20878.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

