Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | EVY18_25345 | Not Available | Negative | 4925529 - 4925696 | 6371.94 |
| 50s ribosomal protein l28 | EVY18_25350 | Not Available | Negative | 4925717 - 4925953 | 9037.05 |
| jab domain-containing protein | EVY18_25355 | Not Available | Negative | 4926172 - 4926837 | 24999.5 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EVY18_25360 | Not Available | Positive | 4927008 - 4928228 | 43339.3 |
| dutp diphosphatase | EVY18_25365 | Not Available | Positive | 4928206 - 4928462 | 8897.05 |
| pqia/yebs family transporter subunit | EVY18_25370 | Not Available | Positive | 4928463 - 4929130 | 24631.9 |
| intermembrane transport protein pqib | EVY18_25375 | Not Available | Positive | 4929135 - 4930775 | 60501.6 |
| membrane integrity-associated transporter subunit pqic | EVY18_25380 | Not Available | Positive | 4930772 - 4931335 | 20719.7 |
| ribosome modulation factor | EVY18_25385 | Not Available | Positive | 4931592 - 4931759 | 6542.93 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | EVY18_25390 | Not Available | Negative | 4931867 - 4932385 | 18984.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

