Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii glutamine amidotransferase | EVY18_24530 | Not Available | Positive | 4779583 - 4780350 | 28535.1 |
| murein l,d-transpeptidase | EVY18_24535 | Not Available | Negative | 4780321 - 4781061 | 27984.6 |
| peptidoglycan endopeptidase | EVY18_24540 | Not Available | Positive | 4781411 - 4782172 | 29099.7 |
| flagellar type iii secretion system protein flha | EVY18_24545 | Not Available | Negative | 4782210 - 4783931 | 62642.5 |
| putative lateral flagellar export/assembly protein lafu | EVY18_24550 | Not Available | Positive | 4783915 - 4784754 | 30902.2 |
| dna primase | EVY18_24555 | Not Available | Positive | 4784811 - 4785452 | 24944.0 |
| dna polymerase iv | EVY18_24560 | Not Available | Positive | 4785519 - 4786574 | 39641.2 |
| m20/m25/m40 family metallo-hydrolase | EVY18_24565 | Not Available | Negative | 4786675 - 4787262 | 21247.6 |
| duf4113 domain-containing protein | EVY18_24570 | Not Available | Positive | 4787263 - 4788173 | 33941.8 |
| dna replication protein | EVY18_24575 | Not Available | Positive | 4788323 - 4789213 | 33609.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

