Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | EVY18_23820 | Not Available | Negative | 4654029 - 4654367 | 12696.2 |
| outer membrane protein assembly factor bamd | EVY18_23825 | Not Available | Negative | 4654637 - 4655374 | 27785.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | EVY18_23830 | Not Available | Positive | 4655506 - 4656486 | 37135.9 |
| polyphenol oxidase | EVY18_23835 | Not Available | Positive | 4656483 - 4657214 | 26290.2 |
| atp-dependent chaperone clpb | EVY18_23840 | Not Available | Positive | 4657344 - 4659917 | 95517.7 |
| duf2057 family protein | EVY18_23845 | Not Available | Positive | 4660051 - 4660655 | 22696.8 |
| methylglyoxal synthase | EVY18_23850 | Not Available | Positive | 4660749 - 4661207 | 16885.5 |
| dna helicase iv | EVY18_23855 | Not Available | Negative | 4661240 - 4663294 | 77728.1 |
| yccf domain-containing protein | EVY18_23860 | Not Available | Positive | 4663420 - 4663866 | 16393.5 |
| tigr01666 family membrane protein | EVY18_23865 | Not Available | Positive | 4663885 - 4666038 | 81334.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

