Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | EVY18_23770 | Not Available | Positive | 4646053 - 4646820 | 28465.1 |
| 50s ribosomal protein l19 | EVY18_23775 | Not Available | Positive | 4646860 - 4647207 | 13134.0 |
| ompa family protein | EVY18_23780 | Not Available | Negative | 4647339 - 4647821 | 17465.8 |
| diguanylate cyclase dgcn | EVY18_23785 | Not Available | Negative | 4647834 - 4649060 | 45874.0 |
| yfir family protein | EVY18_23790 | Not Available | Negative | 4649053 - 4649571 | 19047.2 |
| duf2799 domain-containing protein | EVY18_23795 | Not Available | Negative | 4649730 - 4650104 | 13856.2 |
| 3-deoxy-7-phosphoheptulonate synthase arof | EVY18_23800 | Not Available | Positive | 4650319 - 4651389 | 38923.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | EVY18_23805 | Not Available | Positive | 4651400 - 4652521 | 41927.7 |
| bifunctional chorismate mutase/prephenate dehydratase | EVY18_23810 | Not Available | Negative | 4652618 - 4653778 | 42891.5 |
| hypothetical protein | EVY18_23815 | Not Available | Negative | 4653878 - 4653925 | 1886.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

