Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EVY18_23515 | Not Available | Negative | 4601959 - 4602747 | 29362.6 |
| (2e,6e)-farnesyl- diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EVY18_23520 | Not Available | Positive | 4602918 - 4603079 | 6198.06 |
| phosphatidate cytidylyltransferase | EVY18_23525 | Not Available | Positive | 4603092 - 4603949 | 31457.6 |
| sigma e protease regulator rsep | EVY18_23530 | Not Available | Positive | 4603961 - 4605313 | 49216.2 |
| outer membrane protein assembly factor bama | EVY18_23535 | Not Available | Positive | 4605343 - 4607766 | 89788.8 |
| molecular chaperone skp | EVY18_23540 | Not Available | Positive | 4607889 - 4608374 | 17685.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EVY18_23545 | Not Available | Positive | 4608378 - 4608547 | 6101.28 |
| l-ala-d/l-glu epimerase | EVY18_23550 | Not Available | Negative | 4608548 - 4609234 | 24650.4 |
| thiol peroxidase | EVY18_23555 | Not Available | Positive | 4609350 - 4609856 | 17796.3 |
| transcriptional regulator tyrr | EVY18_23560 | Not Available | Negative | 4609910 - 4610965 | 39213.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

