Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | EVY18_22360 | Not Available | Negative | 4405176 - 4405610 | 15886.2 |
| tripartite tricarboxylate transporter substrate binding protein | EVY18_22365 | Not Available | Negative | 4405625 - 4406602 | 35499.9 |
| transcriptional regulator tctd | EVY18_22370 | Not Available | Positive | 4406756 - 4407430 | 25170.6 |
| sensor histidine kinase | EVY18_22375 | Not Available | Positive | 4407417 - 4408868 | 54538.5 |
| fimbrial protein | EVY18_22380 | Not Available | Negative | 4408861 - 4409943 | 38302.1 |
| fimbrial biogenesis outer membrane usher protein | EVY18_22385 | Not Available | Negative | 4409954 - 4412512 | 94096.6 |
| molecular chaperone | EVY18_22390 | Not Available | Negative | 4412526 - 4413197 | 25143.0 |
| type 1 fimbrial protein | EVY18_22395 | Not Available | Negative | 4413252 - 4413839 | 19720.0 |
| transcriptional antiterminator | EVY18_22405 | Not Available | Positive | 4414775 - 4415059 | 10662.5 |
| deor/glpr transcriptional regulator | EVY18_22410 | Not Available | Negative | 4415056 - 4415826 | 27502.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

