Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein sapd | EVY18_20885 | Not Available | Negative | 4132039 - 4133031 | 37658.9 |
| peptide abc transporter permease sapc | EVY18_20890 | Not Available | Negative | 4133031 - 4133921 | 31518.0 |
| peptide abc transporter permease sapb | EVY18_20895 | Not Available | Negative | 4133908 - 4134172 | 9615.11 |
| exopolyphosphatase | EVY18_20905 | Not Available | Positive | 4135312 - 4136853 | 58000.0 |
| sensor domain-containing phosphodiesterase | EVY18_20910 | Not Available | Negative | 4136833 - 4139103 | 86520.9 |
| is5 family transposase | EVY18_20915 | Not Available | Negative | 4139523 - 4140446 | 34940.1 |
| attachment protein | EVY18_20920 | Not Available | Positive | 4141890 - 4145432 | 126447.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | EVY18_20925 | Not Available | Positive | 4145866 - 4150221 | 152451.0 |
| 5-deoxy-glucuronate isomerase | EVY18_20930 | Not Available | Negative | 4150435 - 4151253 | 30895.3 |
| myo-inosose-2 dehydratase | EVY18_20935 | Not Available | Negative | 4151263 - 4152153 | 32678.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

