Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | EVY18_19355 | Not Available | Negative | 3832044 - 3833444 | 49749.5 |
| leu operon leader peptide | EVY18_19365 | Not Available | Negative | 3836187 - 3836273 | 3187.92 |
| adenosylcobalamin/alpha-ribazole phosphatase | EVY18_19370 | Not Available | Positive | 3836626 - 3837213 | 22130.2 |
| ribosome silencing factor | EVY18_19375 | Not Available | Positive | 3837468 - 3837785 | 11625.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EVY18_19380 | Not Available | Positive | 3837789 - 3838256 | 17372.1 |
| penicillin-binding protein 2 | EVY18_19385 | Not Available | Positive | 3838287 - 3840188 | 70795.6 |
| rod shape-determining protein roda | EVY18_19390 | Not Available | Positive | 3840191 - 3841303 | 40537.6 |
| endolytic peptidoglycan transglycosylase rlpa | EVY18_19395 | Not Available | Positive | 3841314 - 3842423 | 38185.0 |
| serine-type d-ala-d-ala carboxypeptidase | EVY18_19400 | Not Available | Positive | 3842566 - 3843777 | 44413.4 |
| duf493 family protein | EVY18_19405 | Not Available | Positive | 3843884 - 3844147 | 9786.82 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

