Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | EVY18_18165 | Not Available | Positive | 3601124 - 3601345 | 7897.45 |
| l-asparagine permease | EVY18_18170 | Not Available | Negative | 3601387 - 3602829 | 52111.9 |
| pas domain s-box protein | EVY18_18175 | Not Available | Negative | 3603109 - 3604650 | 56433.9 |
| msno8 family llm class oxidoreductase | EVY18_18180 | Not Available | Positive | 3605158 - 3606156 | 36031.9 |
| amidohydrolase | EVY18_18185 | Not Available | Positive | 3606156 - 3607277 | 40271.9 |
| llm class flavin-dependent oxidoreductase | EVY18_18190 | Not Available | Positive | 3607303 - 3608616 | 48424.5 |
| abc transporter substrate-binding protein | EVY18_18195 | Not Available | Positive | 3608629 - 3609561 | 32897.2 |
| gnat family n-acetyltransferase | EVY18_18200 | Not Available | Positive | 3609572 - 3609870 | 11319.4 |
| sensor histidine kinase | EVY18_18205 | Not Available | Negative | 3609871 - 3610792 | 34212.5 |
| tetrathionate reductase subunit ttrb | EVY18_18210 | Not Available | Positive | 3611002 - 3611754 | 27618.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

