Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EVY18_17805 | Not Available | Positive | 3531542 - 3531769 | 8724.69 |
| Trna-thr | Not Available | Not Available | Positive | 3531813 - 3531888 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3531897 - 3531981 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3532096 - 3532170 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3532176 - 3532251 | Not Available |
| elongation factor tu | EVY18_17830 | Not Available | Positive | 3532370 - 3532563 | 6980.28 |
| ssra-binding protein smpb | EVY18_17835 | Not Available | Negative | 3532879 - 3533361 | 18184.0 |
| type ii toxin-antitoxin system rata family toxin | EVY18_17840 | Not Available | Positive | 3533504 - 3533959 | 16856.5 |
| rnfh family protein | EVY18_17845 | Not Available | Positive | 3533943 - 3534239 | 11017.4 |
| outer membrane protein assembly factor bame | EVY18_17850 | Not Available | Negative | 3534290 - 3534634 | 12506.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

