Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | EVY18_16580 | Not Available | Negative | 3310286 - 3311293 | 37810.6 |
| duf1414 domain-containing protein | EVY18_16585 | Not Available | Positive | 3311428 - 3311655 | 8330.93 |
| duf3413 domain-containing protein | EVY18_16590 | Not Available | Positive | 3311687 - 3313447 | 66995.5 |
| Trna-pro | Not Available | Not Available | Positive | 3313522 - 3313598 | Not Available |
| replication initiation protein | EVY18_16600 | Not Available | Negative | 3314012 - 3314104 | 3413.12 |
| group ii intron reverse transcriptase/maturase | EVY18_16610 | Not Available | Negative | 3315014 - 3316498 | 57575.2 |
| hypothetical protein | EVY18_16615 | Not Available | Negative | 3316498 - 3316749 | 9049.76 |
| translesion error-prone dna polymerase v autoproteolytic subunit | EVY18_16620 | Not Available | Positive | 3316907 - 3317338 | 15934.0 |
| translesion error-prone dna polymerase v subunit umuc | EVY18_16625 | Not Available | Positive | 3317338 - 3318609 | 47855.6 |
| parb/repb/spo0j family partition protein | EVY18_16630 | Not Available | Negative | 3318691 - 3319668 | 36686.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

