Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export chaperone flis | EVY18_16360 | Not Available | Negative | 3267082 - 3267489 | 14620.4 |
| flagellar filament capping protein flid | EVY18_16365 | Not Available | Negative | 3267505 - 3268905 | 49793.7 |
| flagellin flic | EVY18_16370 | Not Available | Positive | 3269161 - 3270432 | 44809.8 |
| rna polymerase sigma factor flia | EVY18_16375 | Not Available | Positive | 3270595 - 3271314 | 27461.8 |
| flagella biosynthesis regulatory protein fliz | EVY18_16380 | Not Available | Positive | 3271371 - 3271922 | 21726.9 |
| cystine abc transporter substrate-binding protein | EVY18_16385 | Not Available | Positive | 3272023 - 3272823 | 29000.1 |
| d-cysteine desulfhydrase | EVY18_16390 | Not Available | Positive | 3272932 - 3273918 | 35226.5 |
| cystine abc transporter permease | EVY18_16395 | Not Available | Positive | 3273940 - 3274608 | 24792.8 |
| atp-binding cassette domain-containing protein | EVY18_16400 | Not Available | Positive | 3274605 - 3275128 | 19062.4 |
| hypothetical protein | EVY18_16405 | Not Available | Negative | 3275129 - 3275371 | 9104.85 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

