Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | EVY18_14260 | Not Available | Positive | 2856032 - 2856838 | 28759.7 |
| ggdef domain-containing protein | EVY18_14265 | Not Available | Negative | 2856871 - 2858343 | 55229.0 |
| hypothetical protein | EVY18_14270 | Not Available | Negative | 2858530 - 2858805 | 10111.2 |
| hypothetical protein | EVY18_14275 | Not Available | Positive | 2859045 - 2859503 | 17645.8 |
| yebc/pmpr family dna-binding transcriptional regulator | EVY18_14280 | Not Available | Negative | 2859576 - 2860292 | 25729.2 |
| glycosyltransferase family 8 protein | EVY18_14285 | Not Available | Negative | 2860425 - 2861327 | 35634.2 |
| lipopolysaccharide core heptosyltransferase rfaq | EVY18_14290 | Not Available | Negative | 2861328 - 2862383 | 40191.8 |
| glycosyltransferase family 2 protein | EVY18_14295 | Not Available | Negative | 2862385 - 2863398 | 39461.7 |
| ligase | EVY18_14300 | Not Available | Negative | 2863391 - 2864569 | 43038.5 |
| lipopolysaccharide heptosyltransferase rfac | EVY18_14305 | Not Available | Negative | 2864691 - 2865659 | 35961.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

