Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EVY18_13900 | Not Available | Positive | 2796988 - 2798547 | 57711.8 |
| pilus assembly protein pilr | EVY18_13905 | Not Available | Positive | 2798540 - 2799634 | 41291.3 |
| pilus assembly protein pilx | EVY18_13910 | Not Available | Positive | 2799648 - 2800262 | 21370.5 |
| pilus assembly protein | EVY18_13915 | Not Available | Positive | 2800347 - 2800829 | 18193.9 |
| prepilin peptidase | EVY18_13920 | Not Available | Positive | 2800814 - 2801488 | 24239.3 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EVY18_13925 | Not Available | Positive | 2801485 - 2802499 | 35456.6 |
| dgqhr domain-containing protein | EVY18_13930 | Not Available | Negative | 2802500 - 2802819 | 11800.4 |
| xre family transcriptional regulator | EVY18_13935 | Not Available | Negative | 2802883 - 2803149 | 9884.88 |
| dna repair protein radc | EVY18_13940 | Not Available | Negative | 2803194 - 2803643 | 16217.6 |
| duf3085 domain-containing protein | EVY18_13945 | Not Available | Negative | 2803765 - 2804127 | 13498.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

