Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | EVY18_13850 | Not Available | Negative | 2787067 - 2788569 | 55990.1 |
| ribulokinase | EVY18_13855 | Not Available | Negative | 2788580 - 2790289 | 61827.4 |
| arabinose operon transcriptional regulator arac | EVY18_13860 | Not Available | Positive | 2790629 - 2791474 | 32124.2 |
| deda family protein | EVY18_13865 | Not Available | Positive | 2791594 - 2792361 | 28401.0 |
| thiamine abc transporter atp-binding protein | EVY18_13870 | Not Available | Negative | 2792406 - 2792557 | 5019.94 |
| pili assembly chaperone | EVY18_13875 | Not Available | Positive | 2792558 - 2792915 | 12927.5 |
| pilus assembly protein pilp | EVY18_13880 | Not Available | Positive | 2792915 - 2793352 | 16032.3 |
| piln family type ivb pilus formation outer membrane protein | EVY18_13885 | Not Available | Positive | 2793367 - 2795043 | 59349.1 |
| hypothetical protein | EVY18_13890 | Not Available | Positive | 2795045 - 2795746 | 25979.1 |
| type iv pilus biogenesis protein pilp | EVY18_13895 | Not Available | Positive | 2795882 - 2796985 | 39781.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

