Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | EVY18_12390 | Not Available | Negative | 2499094 - 2500461 | 51304.1 |
| s-ribosylhomocysteine lyase | EVY18_12395 | Not Available | Negative | 2500808 - 2501323 | 19340.3 |
| glutamate--cysteine ligase | EVY18_12400 | Not Available | Negative | 2501473 - 2503029 | 58387.8 |
| deda family protein | EVY18_12405 | Not Available | Negative | 2503107 - 2503535 | 15564.5 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EVY18_12410 | Not Available | Negative | 2503532 - 2504098 | 20788.0 |
| Trna-ser | Not Available | Not Available | Positive | 2504621 - 2504713 | Not Available |
| carbon storage regulator | EVY18_12420 | Not Available | Negative | 2505055 - 2505240 | 6856.34 |
| alanine--trna ligase | EVY18_12425 | Not Available | Negative | 2505478 - 2508105 | 95605.3 |
| recombination regulator recx | EVY18_12430 | Not Available | Negative | 2508234 - 2508734 | 19547.3 |
| recombinase reca | EVY18_12435 | Not Available | Negative | 2508807 - 2509871 | 38177.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

