Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EVY18_12285 | Not Available | Positive | 2481193 - 2481372 | 6429.61 |
| dna-binding protein stpa | EVY18_12290 | Not Available | Negative | 2481409 - 2481810 | 15172.3 |
| l-alanine exporter alae | EVY18_12295 | Not Available | Positive | 2482368 - 2482817 | 16810.7 |
| duf2002 family protein | EVY18_12300 | Not Available | Negative | 2482854 - 2483204 | 13270.7 |
| plp-dependent aminotransferase family protein | EVY18_12305 | Not Available | Negative | 2483453 - 2484787 | 49869.0 |
| carboxymuconolactone decarboxylase family protein | EVY18_12310 | Not Available | Positive | 2484878 - 2485309 | 16039.3 |
| hypothetical protein | EVY18_12315 | Not Available | Positive | 2485410 - 2485682 | 10595.2 |
| glutaredoxin-like protein nrdh | EVY18_12320 | Not Available | Positive | 2485589 - 2485834 | 9330.16 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | EVY18_12325 | Not Available | Positive | 2485831 - 2486241 | 15296.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | EVY18_12330 | Not Available | Positive | 2486214 - 2488358 | 80364.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

