Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | EVY18_12235 | Not Available | Negative | 2473080 - 2474018 | 34769.1 |
| l-2-hydroxyglutarate oxidase | EVY18_12240 | Not Available | Positive | 2474162 - 2474323 | 5542.58 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EVY18_12245 | Not Available | Positive | 2474347 - 2475795 | 51838.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EVY18_12250 | Not Available | Positive | 2475821 - 2477104 | 45715.2 |
| gaba permease | EVY18_12255 | Not Available | Positive | 2477233 - 2478633 | 50963.9 |
| dna-binding transcriptional regulator csir | EVY18_12260 | Not Available | Positive | 2478679 - 2479365 | 26057.6 |
| peptidoglycan-binding protein lysm | EVY18_12265 | Not Available | Negative | 2479378 - 2479827 | 16034.9 |
| yqae/pmp3 family membrane protein | EVY18_12270 | Not Available | Negative | 2479923 - 2480081 | 5898.6 |
| arsr family transcriptional regulator | EVY18_12275 | Not Available | Positive | 2480266 - 2480565 | 10617.0 |
| duf2892 domain-containing protein | EVY18_12280 | Not Available | Positive | 2480575 - 2481102 | 18585.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

