Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EVY18_12015 | Not Available | Positive | 2431024 - 2431959 | 34799.2 |
| aspartate/glutamate racemase | EVY18_12020 | Not Available | Negative | 2431931 - 2432638 | 25777.9 |
| cupin domain-containing protein | EVY18_12025 | Not Available | Positive | 2432780 - 2433106 | 12178.6 |
| rpn family recombination-promoting nuclease/putative transposase | EVY18_12030 | Not Available | Positive | 2433303 - 2434190 | 33800.1 |
| sugar porter family mfs transporter | EVY18_12035 | Not Available | Negative | 2434246 - 2435664 | 51701.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EVY18_12040 | Not Available | Negative | 2435979 - 2436740 | 27099.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EVY18_12045 | Not Available | Negative | 2436798 - 2437634 | 31130.3 |
| acetyl-coa c-acetyltransferase | EVY18_12050 | Not Available | Negative | 2438106 - 2439284 | 41327.6 |
| lysr family transcriptional regulator | EVY18_12055 | Not Available | Negative | 2439387 - 2440271 | 32736.2 |
| multidrug/biocide efflux pace transporter | EVY18_12060 | Not Available | Positive | 2440373 - 2440828 | 17437.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

