Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone fimc | EVY18_11865 | Not Available | Positive | 2392497 - 2393189 | 25109.5 |
| fimbrial biogenesis outer membrane usher protein | EVY18_11870 | Not Available | Positive | 2393197 - 2395818 | 95435.5 |
| type 1 fimbrin d-mannose specific adhesin fimh | EVY18_11875 | Not Available | Positive | 2395823 - 2396830 | 36316.1 |
| fimbriae assembly protein | EVY18_11880 | Not Available | Positive | 2396865 - 2397359 | 17150.2 |
| fimbriae biosynthesis transcriptional regulator fimz | EVY18_11885 | Not Available | Negative | 2397409 - 2398041 | 23625.9 |
| n-acetylmuramoyl-l-alanine amidase | EVY18_11890 | Not Available | Negative | 2398453 - 2399706 | 45500.0 |
| amino-acid n-acetyltransferase | EVY18_11895 | Not Available | Positive | 2399940 - 2401271 | 49415.5 |
| exodeoxyribonuclease v subunit alpha | EVY18_11900 | Not Available | Negative | 2401399 - 2403228 | 66398.6 |
| exodeoxyribonuclease v subunit beta | EVY18_11905 | Not Available | Negative | 2403225 - 2406770 | 133105.0 |
| pitrilysin | EVY18_11910 | Not Available | Negative | 2406763 - 2409651 | 107486.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

