Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | EVY18_11565 | Not Available | Negative | 2329835 - 2330431 | 21498.3 |
| hypothetical protein | EVY18_11570 | Not Available | Negative | 2330444 - 2330992 | 19903.5 |
| type 1 fimbrial protein | EVY18_11575 | Not Available | Negative | 2331003 - 2331560 | 19879.5 |
| type 1 fimbrial protein | EVY18_11580 | Not Available | Negative | 2331622 - 2332224 | 20496.1 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | EVY18_11585 | Not Available | Positive | 2332558 - 2334210 | 60634.2 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | EVY18_11590 | Not Available | Negative | 2334318 - 2334797 | 17143.9 |
| hypothetical protein | EVY18_11595 | Not Available | Negative | 2334999 - 2335793 | 29636.9 |
| copper-exporting p-type atpase copa | EVY18_11600 | Not Available | Negative | 2335894 - 2338395 | 87819.1 |
| heme abc transporter atp-binding protein | EVY18_11605 | Not Available | Negative | 2338543 - 2339313 | 29352.7 |
| iron abc transporter permease | EVY18_11610 | Not Available | Negative | 2339310 - 2340314 | 35578.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

