Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | EVY18_11515 | Not Available | Negative | 2319190 - 2319417 | 8144.64 |
| cysteine desulfurase csda | EVY18_11520 | Not Available | Positive | 2319610 - 2320815 | 42860.2 |
| cysteine desulfurase sulfur acceptor subunit csde | EVY18_11525 | Not Available | Positive | 2320815 - 2321261 | 16109.4 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EVY18_11530 | Not Available | Negative | 2321339 - 2322145 | 28542.6 |
| murein transglycosylase a | EVY18_11535 | Not Available | Negative | 2322255 - 2323352 | 40136.5 |
| hypothetical protein | EVY18_11540 | Not Available | Negative | 2324130 - 2325173 | 36737.5 |
| hypothetical protein | EVY18_11545 | Not Available | Negative | 2325186 - 2325770 | 20590.4 |
| hypothetical protein | EVY18_11550 | Not Available | Negative | 2325786 - 2326379 | 21629.1 |
| outer membrane usher protein | EVY18_11555 | Not Available | Negative | 2326376 - 2328988 | 93495.0 |
| fimbrial chaperone | EVY18_11560 | Not Available | Negative | 2329030 - 2329716 | 25213.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

