Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EVY18_11465 | Not Available | Negative | 2307865 - 2308815 | 33519.2 |
| abc transporter permease | EVY18_11470 | Not Available | Negative | 2308889 - 2309872 | 34526.9 |
| sugar abc transporter atp-binding protein | EVY18_11475 | Not Available | Negative | 2309876 - 2311375 | 55202.9 |
| l-fucose isomerase | EVY18_11480 | Not Available | Positive | 2311840 - 2313615 | 64996.4 |
| l-fuculokinase | EVY18_11485 | Not Available | Positive | 2313738 - 2315156 | 52098.2 |
| l-fucose mutarotase | EVY18_11490 | Not Available | Positive | 2315158 - 2315580 | 15349.8 |
| l-fucose operon activator | EVY18_11495 | Not Available | Positive | 2315638 - 2316366 | 27222.4 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EVY18_11500 | Not Available | Negative | 2316402 - 2317502 | 41903.6 |
| duf423 domain-containing protein | EVY18_11505 | Not Available | Negative | 2317495 - 2317890 | 14440.1 |
| transcriptional regulator gcva | EVY18_11510 | Not Available | Negative | 2317909 - 2318826 | 34366.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

