Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EVY18_09435 | Not Available | Negative | 1876919 - 1878235 | 48254.1 |
| hypothetical protein | EVY18_09440 | Not Available | Negative | 1878482 - 1878763 | 10866.6 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | EVY18_09445 | Not Available | Negative | 1878866 - 1879579 | 26263.8 |
| abc transporter atp-binding protein | EVY18_09450 | Not Available | Negative | 1879597 - 1880364 | 28437.7 |
| high-affinity branched-chain amino acid abc transporter permease livm | EVY18_09455 | Not Available | Negative | 1880361 - 1881638 | 46371.1 |
| high-affinity branched-chain amino acid abc transporter permease livh | EVY18_09460 | Not Available | Negative | 1881635 - 1882561 | 32953.3 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | EVY18_09465 | Not Available | Negative | 1882623 - 1883732 | 39534.3 |
| aspartate 1-decarboxylase autocleavage activator panm | EVY18_09470 | Not Available | Positive | 1884156 - 1884539 | 14470.1 |
| branched-chain amino acid abc transporter substrate-binding protein | EVY18_09480 | Not Available | Negative | 1884734 - 1885852 | 39664.4 |
| rna polymerase sigma factor rpoh | EVY18_09485 | Not Available | Negative | 1886108 - 1886962 | 32515.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

