Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | EVY18_08450 | Not Available | Negative | 1664012 - 1664416 | 15165.3 |
| is6-like element is26 family transposase | EVY18_08455 | Not Available | Negative | 1664777 - 1665324 | 22152.7 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | EVY18_08460 | Not Available | Positive | 1665967 - 1667535 | 58412.6 |
| cytochrome d ubiquinol oxidase subunit ii | EVY18_08465 | Not Available | Positive | 1667551 - 1668690 | 42286.4 |
| cytochrome bd-i oxidase subunit cydx | EVY18_08470 | Not Available | Positive | 1668705 - 1668818 | 4013.84 |
| cyd operon protein ybge | EVY18_08475 | Not Available | Positive | 1668818 - 1669111 | 10990.9 |
| acyl-coa thioesterase ybgc | EVY18_08480 | Not Available | Positive | 1669262 - 1669666 | 15556.9 |
| tol-pal system protein tolq | EVY18_08485 | Not Available | Positive | 1669663 - 1670355 | 25572.2 |
| colicin uptake protein tolr | EVY18_08490 | Not Available | Positive | 1670359 - 1670787 | 15441.9 |
| cell envelope integrity protein tola | EVY18_08495 | Not Available | Positive | 1670852 - 1672090 | 42032.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

