Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein repa | EVY18_06155 | Not Available | Negative | 1249653 - 1250459 | 31276.9 |
| repa leader peptide tap | EVY18_06160 | Not Available | Negative | 1250587 - 1250664 | 2957.82 |
| replication regulatory protein repa | EVY18_06170 | Not Available | Negative | 1250897 - 1251139 | 9101.91 |
| phospholipase d family protein | EVY18_06175 | Not Available | Negative | 1251271 - 1251834 | 20643.9 |
| hypothetical protein | EVY18_06180 | Not Available | Negative | 1251983 - 1252336 | 12800.5 |
| type-f conjugative transfer system pilin acetylase trax | EVY18_06185 | Not Available | Negative | 1252378 - 1253109 | 26637.7 |
| duf2726 domain-containing protein | EVY18_06190 | Not Available | Negative | 1253106 - 1253672 | 21877.8 |
| conjugative transfer relaxase/helicase trai | EVY18_06195 | Not Available | Negative | 1253691 - 1258994 | 193180.0 |
| type iv conjugative transfer system coupling protein trad | EVY18_06200 | Not Available | Negative | 1258994 - 1261228 | 83694.9 |
| complement resistance protein trat | EVY18_06205 | Not Available | Negative | 1261379 - 1262116 | 26004.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

