Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EVY18_05025 | Not Available | Negative | 1013814 - 1014776 | 36376.6 |
| mipa/ompv family protein | EVY18_05030 | Not Available | Positive | 1014898 - 1015638 | 27300.8 |
| glycoside hydrolase family 127 protein | EVY18_05035 | Not Available | Negative | 1015738 - 1017693 | 74470.6 |
| mfs transporter | EVY18_05040 | Not Available | Negative | 1017704 - 1019104 | 51473.1 |
| helix-turn-helix domain-containing protein | EVY18_05045 | Not Available | Positive | 1019357 - 1020172 | 30748.4 |
| l-ribulose-5-phosphate 4-epimerase | EVY18_05050 | Not Available | Negative | 1020177 - 1020872 | 25548.3 |
| l-ribulose-5-phosphate 3-epimerase | EVY18_05055 | Not Available | Negative | 1020866 - 1021726 | 32406.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | EVY18_05060 | Not Available | Negative | 1021719 - 1022381 | 23443.0 |
| carbohydrate kinase | EVY18_05065 | Not Available | Negative | 1022381 - 1023883 | 55003.4 |
| mfs transporter | EVY18_05070 | Not Available | Negative | 1023981 - 1025300 | 47548.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

