Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain ICR003203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394129 bp
Thymine Count
1389524 bp
Guanine Count
1469456 bp
Cytosine Count
1500121 bp
Genome Length
5800903 bp
Protein-coding Genes
5611 genes
Non-Coding Genes
331 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor brkb family protein | EVY18_04720 | Not Available | Positive | 953400 - 954272 | 32789.6 |
| d-tyrosyl-trna(tyr) deacylase | EVY18_04725 | Not Available | Positive | 954269 - 954706 | 16003.1 |
| gnat family n-acetyltransferase | EVY18_04730 | Not Available | Positive | 954703 - 955692 | 37154.5 |
| alpha/beta hydrolase | EVY18_04740 | Not Available | Negative | 955843 - 956751 | 33436.7 |
| ribbon-helix-helix protein, copg family | EVY18_04745 | Not Available | Positive | 956951 - 957199 | 9670.61 |
| type ii toxin-antitoxin system vapc family toxin | EVY18_04750 | Not Available | Positive | 957199 - 957573 | 13675.7 |
| formate dehydrogenase accessory protein fdhe | EVY18_04755 | Not Available | Negative | 957610 - 958539 | 34856.7 |
| formate dehydrogenase cytochrome b556 subunit | EVY18_04760 | Not Available | Negative | 958536 - 959171 | 24665.7 |
| formate dehydrogenase subunit beta | EVY18_04765 | Not Available | Negative | 959168 - 960070 | 32992.0 |
| formate dehydrogenase-n subunit alpha | EVY18_04770 | Not Available | Negative | 960083 - 963133 | 112012.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

