Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | UL57_04180 | Not Available | Positive | 834395 - 835453 | 38545.9 |
| rna polymerase sigma factor rpoh | UL57_04185 | Not Available | Positive | 835698 - 836552 | 32470.6 |
| branched chain amino acid abc transporter substrate-binding protein | UL57_04190 | Not Available | Positive | 836823 - 837926 | 39078.5 |
| aspartate 1-decarboxylase autocleavage activator panm | UL57_04195 | Not Available | Negative | 838125 - 838508 | 14561.3 |
| branched chain amino acid abc transporter substrate-binding protein | UL57_04200 | Not Available | Positive | 838932 - 840041 | 39380.9 |
| branched-chain amino acid abc transporter permease | UL57_04205 | Not Available | Positive | 840089 - 841015 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | UL57_04210 | Not Available | Positive | 841012 - 842289 | 46342.3 |
| hypothetical protein | UL57_04225 | Not Available | Positive | 843861 - 844607 | 28721.6 |
| smi1/knr4 family protein | UL57_04230 | Not Available | Positive | 844628 - 845311 | 26954.4 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | UL57_04235 | Not Available | Positive | 845554 - 846870 | 48491.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





