Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | UL57_04080 | Not Available | Negative | 816967 - 817248 | 10152.0 |
| nickel-responsive transcriptional regulator nikr | UL57_04085 | Not Available | Negative | 817492 - 817893 | 15094.7 |
| nickel import atp-binding protein nike | UL57_04090 | Not Available | Negative | 817899 - 818705 | 29653.3 |
| nickel import atp-binding protein nikd | UL57_04095 | Not Available | Negative | 818702 - 819466 | 26909.2 |
| nickel abc transporter permease subunit nikc | UL57_04100 | Not Available | Negative | 819466 - 820299 | 30395.9 |
| nickel abc transporter permease subunit nikb | UL57_04105 | Not Available | Negative | 820296 - 821240 | 35238.2 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | UL57_04110 | Not Available | Negative | 821240 - 822814 | 58860.4 |
| 4'-phosphopantetheinyl transferase | UL57_04115 | Not Available | Negative | 822925 - 823512 | 21724.8 |
| pheromone autoinducer 2 transporter | UL57_04120 | Not Available | Negative | 823567 - 824616 | 38524.8 |
| mfs transporter | UL57_04125 | Not Available | Positive | 824748 - 825965 | 42231.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





