Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bo(3) ubiquinol oxidase subunit 3 | UL57_02890 | Not Available | Positive | 593277 - 593891 | 22624.0 |
| cytochrome bo(3) ubiquinol oxidase subunit 4 | UL57_02895 | Not Available | Positive | 593891 - 594220 | 12030.2 |
| protoheme ix farnesyltransferase | UL57_02900 | Not Available | Positive | 594232 - 595122 | 32284.4 |
| mfs transporter | UL57_02905 | Not Available | Positive | 595271 - 596635 | 48773.9 |
| yajq family cyclic di-gmp-binding protein | UL57_02910 | Not Available | Negative | 596763 - 597254 | 18344.9 |
| 2-dehydropantoate 2-reductase | UL57_02915 | Not Available | Positive | 597422 - 598333 | 33898.8 |
| protein deglycase yajl | UL57_02920 | Not Available | Positive | 598296 - 598886 | 20839.3 |
| trna 4-thiouridine(8) synthase thii | UL57_02925 | Not Available | Negative | 598940 - 600388 | 54976.3 |
| exodeoxyribonuclease 7 small subunit | UL57_02930 | Not Available | Positive | 600594 - 600836 | 8952.42 |
| farnesyl-diphosphate synthase | UL57_02935 | Not Available | Positive | 600836 - 601735 | 32207.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





