Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | UL57_01035 | Not Available | Positive | 211812 - 212810 | 34549.8 |
| aldose 1-epimerase | UL57_01045 | Not Available | Positive | 213949 - 214821 | 32731.3 |
| doxx family protein | UL57_01050 | Not Available | Negative | 214869 - 215291 | 15212.3 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | UL57_01055 | Not Available | Negative | 215388 - 216590 | 43965.8 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | UL57_01060 | Not Available | Negative | 216600 - 217412 | 28471.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | UL57_01065 | Not Available | Negative | 217409 - 217729 | 11329.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | UL57_01075 | Not Available | Negative | 218244 - 219605 | 51140.9 |
| dna-binding transcriptional regulator hcar | UL57_01080 | Not Available | Positive | 219741 - 220631 | 32812.2 |
| 3-phenylpropionate mfs transporter | UL57_01085 | Not Available | Positive | 220791 - 221930 | 41623.2 |
| stationary phase inducible protein csie | UL57_01090 | Not Available | Negative | 221922 - 223202 | 49015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





