Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion factor slma | UL57_00685 | Not Available | Negative | 138315 - 138911 | 22837.7 |
| dutp diphosphatase | UL57_00690 | Not Available | Negative | 139018 - 139473 | 16157.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | UL57_00695 | Not Available | Negative | 139454 - 140674 | 43398.6 |
| dna repair protein radc | UL57_00700 | Not Available | Positive | 140846 - 141514 | 25201.9 |
| 50s ribosomal protein l28 | UL57_00705 | Not Available | Positive | 141731 - 141967 | 9007.02 |
| 50s ribosomal protein l33 | UL57_00710 | Not Available | Positive | 141988 - 142155 | 6371.94 |
| formamidopyrimidine-dna glycosylase | UL57_00715 | Not Available | Positive | 142253 - 143062 | 30261.8 |
| pantetheine-phosphate adenylyltransferase | UL57_00720 | Not Available | Negative | 143101 - 143580 | 17847.7 |
| 3-deoxy-d-manno-octulosonic acid transferase | UL57_00725 | Not Available | Negative | 143588 - 144865 | 47293.9 |
| lipopolysaccharide core heptosyltransferase rfaq | UL57_00730 | Not Available | Positive | 145277 - 146335 | 39448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





