Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine operon protein caie | UL57_13420 | Not Available | Positive | 2595803 - 2596393 | 21143.7 |
| transcriptional activatory protein caif | UL57_13425 | Not Available | Negative | 2596512 - 2596907 | 15437.1 |
| hypothetical protein | UL57_13430 | Not Available | Positive | 2596942 - 2597160 | 8212.92 |
| carbamoyl-phosphate synthase large subunit | UL57_13435 | Not Available | Negative | 2597168 - 2600389 | 117819.0 |
| carbamoyl-phosphate synthase small subunit | UL57_13440 | Not Available | Negative | 2600407 - 2601555 | 41433.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | UL57_13450 | Not Available | Negative | 2602011 - 2602832 | 28731.3 |
| ribonucleoside hydrolase rihc | UL57_13455 | Not Available | Negative | 2602999 - 2603913 | 32689.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | UL57_13460 | Not Available | Negative | 2603979 - 2604929 | 34792.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | UL57_13465 | Not Available | Negative | 2604931 - 2605380 | 16081.9 |
| lipoprotein signal peptidase | UL57_13470 | Not Available | Negative | 2605505 - 2605999 | 18147.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





