Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaef family permuted papain-like enzyme | UL57_11650 | Not Available | Positive | 2249915 - 2250739 | 29863.8 |
| copper homeostasis/adhesion lipoprotein nlpe | UL57_11655 | Not Available | Negative | 2250894 - 2251604 | 25941.8 |
| aminoacyl-trna hydrolase | UL57_11660 | Not Available | Negative | 2251618 - 2252040 | 15577.9 |
| yaeq family protein | UL57_11665 | Not Available | Negative | 2252037 - 2252582 | 20877.7 |
| yaep family protein | UL57_11670 | Not Available | Positive | 2252748 - 2252948 | 7214.59 |
| rho-binding antiterminator | UL57_11675 | Not Available | Positive | 2252941 - 2253195 | 9452.1 |
| trna lysidine(34) synthetase tils | UL57_11680 | Not Available | Negative | 2253244 - 2254542 | 48081.9 |
| voc family protein | UL57_11685 | Not Available | Negative | 2254607 - 2254996 | 14707.4 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | UL57_11695 | Not Available | Negative | 2257293 - 2258252 | 35243.6 |
| dna polymerase iii subunit alpha | UL57_11700 | Not Available | Negative | 2258265 - 2261747 | 129857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





