Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm | UL57_11550 | Not Available | Negative | 2232447 - 2233769 | 49060.6 |
| zinc abc transporter substrate-binding protein | UL57_11555 | Not Available | Negative | 2233785 - 2234717 | 33779.2 |
| mn2+/zn2+abc transporter atp-binding protein | UL57_11560 | Not Available | Positive | 2234796 - 2235551 | 27869.3 |
| zinc abc transporter permease subunit znub | UL57_11565 | Not Available | Positive | 2235548 - 2236333 | 27762.5 |
| holliday junction branch migration dna helicase ruvb | UL57_11570 | Not Available | Negative | 2236480 - 2237490 | 37176.0 |
| holliday junction branch migration protein ruva | UL57_11575 | Not Available | Negative | 2237499 - 2238110 | 22087.0 |
| hypothetical protein | UL57_11580 | Not Available | Negative | 2238249 - 2238314 | 2699.43 |
| yebb family permuted papain-like enzyme | UL57_11585 | Not Available | Positive | 2238385 - 2238987 | 22651.2 |
| crossover junction endodeoxyribonuclease ruvc | UL57_11590 | Not Available | Negative | 2238989 - 2239510 | 18723.9 |
| yebc/pmpr family dna-binding transcriptional regulator | UL57_11595 | Not Available | Negative | 2239545 - 2240285 | 26440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





