Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | UL57_07580 | Not Available | Positive | 1470806 - 1472503 | 63197.0 |
| alcohol dehydrogenase adhp | UL57_07585 | Not Available | Positive | 1472637 - 1473647 | 35382.6 |
| addiction module antidote protein, higa family | UL57_07590 | Not Available | Positive | 1473793 - 1474077 | 10343.6 |
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | UL57_07595 | Not Available | Negative | 1474305 - 1474958 | 25351.9 |
| formate dehydrogenase subunit beta | UL57_07600 | Not Available | Negative | 1474951 - 1475835 | 32225.4 |
| formate dehydrogenase-n subunit alpha | UL57_07605 | Not Available | Negative | 1475848 - 1478895 | 112779.0 |
| drug/metabolite dmt transporter permease | UL57_07610 | Not Available | Positive | 1479127 - 1480008 | 31560.4 |
| porin | UL57_07615 | Not Available | Positive | 1480267 - 1481367 | 41069.5 |
| leucine rich repeat family protein | UL57_07625 | Not Available | Positive | 1482128 - 1482796 | 25249.5 |
| leucine-rich repeat domain-containing protein | UL57_07630 | Not Available | Positive | 1482859 - 1484112 | 47751.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





