Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 10 protein | UL57_07515 | Not Available | Positive | 1458219 - 1459538 | 49573.9 |
| diguanylate cyclase | UL57_07520 | Not Available | Positive | 1459915 - 1461297 | 53179.7 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | UL57_07525 | Not Available | Positive | 1461298 - 1463721 | 91329.7 |
| d-alanyl-d-alanine dipeptidase | UL57_07530 | Not Available | Positive | 1463979 - 1464500 | 19021.6 |
| abc transporter permease | UL57_07540 | Not Available | Positive | 1466126 - 1467148 | 37354.3 |
| abc transporter atp-binding protein | UL57_07550 | Not Available | Positive | 1467558 - 1468445 | 32624.7 |
| atp-binding cassette domain-containing protein | UL57_07555 | Not Available | Positive | 1468438 - 1469364 | 34623.1 |
| peroxiredoxin osmc | UL57_07560 | Not Available | Negative | 1469420 - 1469851 | 15089.0 |
| biofilm-dependent modulation protein | UL57_07570 | Not Available | Positive | 1470195 - 1470410 | 8018.27 |
| stationary-phase-induced ribosome-associated protein | UL57_07575 | Not Available | Positive | 1470512 - 1470649 | 5096.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





