Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | UL57_06900 | Not Available | Negative | 1340805 - 1341917 | 40506.7 |
| penicillin-binding protein 2 | UL57_06905 | Not Available | Negative | 1341920 - 1343821 | 70890.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | UL57_06910 | Not Available | Negative | 1343852 - 1344319 | 17342.1 |
| ribosome silencing factor rsfs | UL57_06915 | Not Available | Negative | 1344323 - 1344640 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | UL57_06920 | Not Available | Negative | 1344900 - 1345511 | 23328.8 |
| nicotinate-nucleotide adenylyltransferase | UL57_06925 | Not Available | Negative | 1345535 - 1346176 | 24538.3 |
| dna polymerase iii subunit delta | UL57_06930 | Not Available | Negative | 1346178 - 1347209 | 38702.0 |
| lps assembly lipoprotein lpte | UL57_06935 | Not Available | Negative | 1347209 - 1347790 | 21371.8 |
| leucine--trna ligase | UL57_06940 | Not Available | Negative | 1347805 - 1350387 | 97252.0 |
| zinc ribbon-containing protein | UL57_06945 | Not Available | Positive | 1350622 - 1351104 | 18798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





