Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | UL57_06460 | Not Available | Negative | 1258053 - 1259042 | 35210.9 |
| chaperone sura | UL57_06465 | Not Available | Negative | 1259042 - 1260328 | 47256.5 |
| lps-assembly protein lptd | UL57_06470 | Not Available | Negative | 1260381 - 1262735 | 89689.8 |
| molecular chaperone djla | UL57_06475 | Not Available | Positive | 1262990 - 1263805 | 30567.2 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | UL57_06480 | Not Available | Negative | 1263922 - 1264581 | 24862.1 |
| rna polymerase-associated protein rapa | UL57_06485 | Not Available | Negative | 1264593 - 1267499 | 109805.0 |
| dna polymerase ii | UL57_06490 | Not Available | Negative | 1267664 - 1270015 | 90015.7 |
| l-ribulose-5-phosphate 4-epimerase | UL57_06495 | Not Available | Negative | 1270090 - 1270785 | 25538.4 |
| l-arabinose isomerase | UL57_06500 | Not Available | Negative | 1270985 - 1272487 | 56106.2 |
| ribulokinase | UL57_06505 | Not Available | Negative | 1272498 - 1274198 | 61117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





