Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella boydii |
| Strain | strain DMB SH134 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1179951 bp
Thymine Count
1180164 bp
Guanine Count
1201480 bp
Cytosine Count
1210614 bp
Genome Length
4772209 bp
Protein-coding Genes
4434 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | UL57_05350 | Not Available | Negative | 1061684 - 1062403 | 25937.4 |
| phosphopentomutase | UL57_05355 | Not Available | Negative | 1062483 - 1063706 | 44372.4 |
| thymidine phosphorylase | UL57_05360 | Not Available | Negative | 1063758 - 1065080 | 47182.9 |
| deoxyribose-phosphate aldolase | UL57_05365 | Not Available | Negative | 1065207 - 1065986 | 27776.4 |
| yjji family glycine radical enzyme | UL57_05370 | Not Available | Positive | 1066244 - 1067794 | 58054.4 |
| yjjw family glycine radical enzyme activase | UL57_05375 | Not Available | Positive | 1067766 - 1068629 | 31683.6 |
| 3-deoxy-8-phosphooctulonate synthase | UL57_05380 | Not Available | Negative | 1068995 - 1069849 | 30834.5 |
| tetratricopeptide repeat-containing protein | UL57_05385 | Not Available | Negative | 1069885 - 1070694 | 30816.0 |
| sirb family protein | UL57_05390 | Not Available | Negative | 1070698 - 1071090 | 14613.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | UL57_05395 | Not Available | Negative | 1071087 - 1071920 | 30983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





