Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_04960 | Not Available | Negative | 1277083 - 1278870 | 67984.3 |
| tonb-dependent receptor | DXD04_04965 | Not Available | Negative | 1278884 - 1281928 | 112470.0 |
| nadh-quinone oxidoreductase subunit n | DXD04_04970 | Not Available | Negative | 1282176 - 1283594 | 51332.0 |
| nadh-quinone oxidoreductase subunit m | DXD04_04975 | Not Available | Negative | 1283619 - 1285100 | 53780.8 |
| nadh-quinone oxidoreductase subunit l | DXD04_04980 | Not Available | Negative | 1285122 - 1287011 | 69832.0 |
| nadh-quinone oxidoreductase subunit nuok | DXD04_04985 | Not Available | Negative | 1287038 - 1287355 | 11768.7 |
| nadh-quinone oxidoreductase subunit j | DXD04_04990 | Not Available | Negative | 1287368 - 1287883 | 18415.7 |
| 4fe-4s dicluster domain-containing protein | DXD04_04995 | Not Available | Negative | 1287900 - 1288349 | 17150.2 |
| nadh-quinone oxidoreductase subunit nuoh | DXD04_05000 | Not Available | Negative | 1288366 - 1289457 | 40343.8 |
| nadh-quinone oxidoreductase subunit d | DXD04_05005 | Not Available | Negative | 1289514 - 1291133 | 61460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

