Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | DXD04_04910 | Not Available | Positive | 1262385 - 1263731 | 51355.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DXD04_04915 | Not Available | Positive | 1263890 - 1264561 | 24841.7 |
| atp-dependent clp protease atp-binding subunit clpx | DXD04_04920 | Not Available | Positive | 1264593 - 1265843 | 46551.3 |
| dna helicase recq | DXD04_04925 | Not Available | Positive | 1265986 - 1268169 | 82025.3 |
| imp dehydrogenase | DXD04_04930 | Not Available | Positive | 1268334 - 1269809 | 52611.7 |
| peptidylprolyl isomerase | DXD04_04935 | Not Available | Positive | 1269932 - 1271239 | 50610.6 |
| peptidylprolyl isomerase | DXD04_04940 | Not Available | Positive | 1271316 - 1272671 | 51722.7 |
| hypothetical protein | DXD04_04945 | Not Available | Positive | 1272749 - 1274371 | 62122.3 |
| hypothetical protein | DXD04_04950 | Not Available | Positive | 1274375 - 1274671 | 11633.4 |
| dna mismatch repair endonuclease mutl | DXD04_04955 | Not Available | Positive | 1274668 - 1276725 | 75742.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

